Hugging Face Datasetsby huggingface

Create and manage datasets on Hugging Face Hub. Supports initializing repos, defining configs/system prompts, streaming row updates, and SQL-based dataset querying/transformation. Designed to work alongside HF MCP server for comprehensive dataset workflows.

npx skills add https://github.com/huggingface/skills --skill hugging-face-datasets

Overview

This skill provides tools to manage datasets on the Hugging Face Hub with a focus on creation, configuration, content management, and SQL-based data manipulation. It is designed to complement the existing Hugging Face MCP server by providing dataset editing and querying capabilities.

Integration with HF MCP Server

  • Use HF MCP Server for: Dataset discovery, search, and metadata retrieval
  • Use This Skill for: Dataset creation, content editing, SQL queries, data transformation, and structured data formatting

Version

2.1.0

Dependencies

This skill uses PEP 723 scripts with inline dependency management

Scripts auto-install requirements when run with: uv run scripts/script_name.py

  • uv (Python package manager)
  • Getting Started: See "Usage Instructions" below for PEP 723 usage

Core Capabilities

1. Dataset Lifecycle Management

  • Initialize: Create new dataset repositories with proper structure
  • Configure: Store detailed configuration including system prompts and metadata
  • Stream Updates: Add rows efficiently without downloading entire datasets

2. SQL-Based Dataset Querying (NEW)

Query any Hugging Face dataset using DuckDB SQL via scripts/sql_manager.py:

  • Direct Queries: Run SQL on datasets using the hf:// protocol
  • Schema Discovery: Describe dataset structure and column types
  • Data Sampling: Get random samples for exploration
  • Aggregations: Count, histogram, unique values analysis
  • Transformations: Filter, join, reshape data with SQL
  • Export & Push: Save results locally or push to new Hub repos

3. Multi-Format Dataset Support

Supports diverse dataset types through template system:

  • Chat/Conversational: Chat templating, multi-turn dialogues, tool usage examples
  • Text Classification: Sentiment analysis, intent detection, topic classification
  • Question-Answering: Reading comprehension, factual QA, knowledge bases
  • Text Completion: Language modeling, code completion, creative writing
  • Tabular Data: Structured data for regression/classification tasks
  • Custom Formats: Flexible schema definition for specialized needs

4. Quality Assurance Features

  • JSON Validation: Ensures data integrity during uploads
  • Batch Processing: Efficient handling of large datasets
  • Error Recovery: Graceful handling of upload failures and conflicts

Usage Instructions

The skill includes two Python scripts that use PEP 723 inline dependency management:

All paths are relative to the directory containing this SKILL.md file. Scripts are run with: uv run scripts/script_name.py [arguments]

  • scripts/dataset_manager.py - Dataset creation and management
  • scripts/sql_manager.py - SQL-based dataset querying and transformation

Prerequisites

  • uv package manager installed
  • HF_TOKEN environment variable must be set with a Write-access token

SQL Dataset Querying (sql_manager.py)

Query, transform, and push Hugging Face datasets using DuckDB SQL. The hf:// protocol provides direct access to any public dataset (or private with token).

Quick Start

# Query a dataset
uv run scripts/sql_manager.py query \
  --dataset "cais/mmlu" \
  --sql "SELECT * FROM data WHERE subject='nutrition' LIMIT 10"

# Get dataset schema
uv run scripts/sql_manager.py describe --dataset "cais/mmlu"

# Sample random rows
uv run scripts/sql_manager.py sample --dataset "cais/mmlu" --n 5

# Count rows with filter
uv run scripts/sql_manager.py count --dataset "cais/mmlu" --where "subject='nutrition'"

SQL Query Syntax

Use data as the table name in your SQL - it gets replaced with the actual hf:// path:

-- Basic select
SELECT * FROM data LIMIT 10

-- Filtering
SELECT * FROM data WHERE subject='nutrition'

-- Aggregations
SELECT subject, COUNT(*) as cnt FROM data GROUP BY subject ORDER BY cnt DESC

-- Column selection and transformation
SELECT question, choices[answer] AS correct_answer FROM data

-- Regex matching
SELECT * FROM data WHERE regexp_matches(question, 'nutrition|diet')

-- String functions
SELECT regexp_replace(question, '\n', '') AS cleaned FROM data

Common Operations

1. Explore Dataset Structure

# Get schema
uv run scripts/sql_manager.py describe --dataset "cais/mmlu"

# Get unique values in column
uv run scripts/sql_manager.py unique --dataset "cais/mmlu" --column "subject"

# Get value distribution
uv run scripts/sql_manager.py histogram --dataset "cais/mmlu" --column "subject" --bins 20

2. Filter and Transform

# Complex filtering with SQL
uv run scripts/sql_manager.py query \
  --dataset "cais/mmlu" \
  --sql "SELECT subject, COUNT(*) as cnt FROM data GROUP BY subject HAVING cnt > 100"

# Using transform command
uv run scripts/sql_manager.py transform \
  --dataset "cais/mmlu" \
  --select "subject, COUNT(*) as cnt" \
  --group-by "subject" \
  --order-by "cnt DESC" \
  --limit 10

3. Create Subsets and Push to Hub

# Query and push to new dataset
uv run scripts/sql_manager.py query \
  --dataset "cais/mmlu" \
  --sql "SELECT * FROM data WHERE subject='nutrition'" \
  --push-to "username/mmlu-nutrition-subset" \
  --private

# Transform and push
uv run scripts/sql_manager.py transform \
  --dataset "ibm/duorc" \
  --config "ParaphraseRC" \
  --select "question, answers" \
  --where "LENGTH(question) > 50" \
  --push-to "username/duorc-long-questions"

4. Export to Local Files

# Export to Parquet
uv run scripts/sql_manager.py export \
  --dataset "cais/mmlu" \
  --sql "SELECT * FROM data WHERE subject='nutrition'" \
  --output "nutrition.parquet" \
  --format parquet

# Export to JSONL
uv run scripts/sql_manager.py export \
  --dataset "cais/mmlu" \
  --sql "SELECT * FROM data LIMIT 100" \
  --output "sample.jsonl" \
  --format jsonl

5. Working with Dataset Configs/Splits

# Specify config (subset)
uv run scripts/sql_manager.py query \
  --dataset "ibm/duorc" \
  --config "ParaphraseRC" \
  --sql "SELECT * FROM data LIMIT 5"

# Specify split
uv run scripts/sql_manager.py query \
  --dataset "cais/mmlu" \
  --split "test" \
  --sql "SELECT COUNT(*) FROM data"

# Query all splits
uv run scripts/sql_manager.py query \
  --dataset "cais/mmlu" \
  --split "*" \
  --sql "SELECT * FROM data LIMIT 10"

6. Raw SQL with Full Paths

For complex queries or joining datasets:

uv run scripts/sql_manager.py raw --sql "
  SELECT a.*, b.* 
  FROM 'hf://datasets/dataset1@~parquet/default/train/*.parquet' a
  JOIN 'hf://datasets/dataset2@~parquet/default/train/*.parquet' b
  ON a.id = b.id
  LIMIT 100
"

Python API Usage

from sql_manager import HFDatasetSQL

sql = HFDatasetSQL()

# Query
results = sql.query("cais/mmlu", "SELECT * FROM data WHERE subject='nutrition' LIMIT 10")

# Get schema
schema = sql.describe("cais/mmlu")

# Sample
samples = sql.sample("cais/mmlu", n=5, seed=42)

# Count
count = sql.count("cais/mmlu", where="subject='nutrition'")

# Histogram
dist = sql.histogram("cais/mmlu", "subject")

# Filter and transform
results = sql.filter_and_transform(
    "cais/mmlu",
    select="subject, COUNT(*) as cnt",
    group_by="subject",
    order_by="cnt DESC",
    limit=10
)

# Push to Hub
url = sql.push_to_hub(
    "cais/mmlu",
    "username/nutrition-subset",
    sql="SELECT * FROM data WHERE subject='nutrition'",
    private=True
)

# Export locally
sql.export_to_parquet("cais/mmlu", "output.parquet", sql="SELECT * FROM data LIMIT 100")

sql.close()

HF Path Format

DuckDB uses the hf:// protocol to access datasets:

hf://datasets/{dataset_id}@{revision}/{config}/{split}/*.parquet

Examples:

  • hf://datasets/cais/mmlu@~parquet/default/train/*.parquet
  • hf://datasets/ibm/duorc@~parquet/ParaphraseRC/test/*.parquet

The @~parquet revision provides auto-converted Parquet files for any dataset format.

Useful DuckDB SQL Functions

-- String functions
LENGTH(column)                    -- String length
regexp_replace(col, '\n', '')     -- Regex replace
regexp_matches(col, 'pattern')    -- Regex match
LOWER(col), UPPER(col)           -- Case conversion

-- Array functions  
choices[0]                        -- Array indexing (0-based)
array_length(choices)             -- Array length
unnest(choices)                   -- Expand array to rows

-- Aggregations
COUNT(*), SUM(col), AVG(col)
GROUP BY col HAVING condition

-- Sampling
USING SAMPLE 10                   -- Random sample
USING SAMPLE 10 (RESERVOIR, 42)   -- Reproducible sample

-- Window functions
ROW_NUMBER() OVER (PARTITION BY col ORDER BY col2)

Dataset Creation (dataset_manager.py)

Recommended Workflow

1. Discovery (Use HF MCP Server):

# Use HF MCP tools to find existing datasets
search_datasets("conversational AI training")
get_dataset_details("username/dataset-name")

2. Creation (Use This Skill):

# Initialize new dataset
uv run scripts/dataset_manager.py init --repo_id "your-username/dataset-name" [--private]

# Configure with detailed system prompt
uv run scripts/dataset_manager.py config --repo_id "your-username/dataset-name" --system_prompt "$(cat system_prompt.txt)"

3. Content Management (Use This Skill):

# Quick setup with any template
uv run scripts/dataset_manager.py quick_setup \
  --repo_id "your-username/dataset-name" \
  --template classification

# Add data with template validation
uv run scripts/dataset_manager.py add_rows \
  --repo_id "your-username/dataset-name" \
  --template qa \
  --rows_json "$(cat your_qa_data.json)"

Template-Based Data Structures

1. Chat Template (--template chat)

{
  "messages": [
    {"role": "user", "content": "Natural user request"},
    {"role": "assistant", "content": "Response with tool usage"},
    {"role": "tool", "content": "Tool response", "tool_call_id": "call_123"}
  ],
  "scenario": "Description of use case",
  "complexity": "simple|intermediate|advanced"
}

2. Classification Template (--template classification)

{
  "text": "Input text to be classified",
  "label": "classification_label",
  "confidence": 0.95,
  "metadata": {"domain": "technology", "language": "en"}
}

3. QA Template (--template qa)

{
  "question": "What is the question being asked?",
  "answer": "The complete answer",
  "context": "Additional context if needed",
  "answer_type": "factual|explanatory|opinion",
  "difficulty": "easy|medium|hard"
}

4. Completion Template (--template completion)

{
  "prompt": "The beginning text or context",
  "completion": "The expected continuation",
  "domain": "code|creative|technical|conversational",
  "style": "description of writing style"
}

5. Tabular Template (--template tabular)

{
  "columns": [
    {"name": "feature1", "type": "numeric", "description": "First feature"},
    {"name": "target", "type": "categorical", "description": "Target variable"}
  ],
  "data": [
    {"feature1": 123, "target": "class_a"},
    {"feature1": 456, "target": "class_b"}
  ]
}

Advanced System Prompt Template

For high-quality training data generation:

You are an AI assistant expert at using MCP tools effectively.

## MCP SERVER DEFINITIONS
[Define available servers and tools]

## TRAINING EXAMPLE STRUCTURE
[Specify exact JSON schema for chat templating]

## QUALITY GUIDELINES
[Detail requirements for realistic scenarios, progressive complexity, proper tool usage]

## EXAMPLE CATEGORIES
[List development workflows, debugging scenarios, data management tasks]

Example Categories & Templates

The skill includes diverse training examples beyond just MCP usage:

Available Example Sets:

  • training_examples.json - MCP tool usage examples (debugging, project setup, database analysis)
  • diverse_training_examples.json - Broader scenarios including:
    • Educational Chat - Explaining programming concepts, tutorials
    • Git Workflows - Feature branches, version control guidance
    • Code Analysis - Performance optimization, architecture review
    • Content Generation - Professional writing, creative brainstorming
    • Codebase Navigation - Legacy code exploration, systematic analysis
    • Conversational Support - Problem-solving, technical discussions

Using Different Example Sets:

# Add MCP-focused examples
uv run scripts/dataset_manager.py add_rows --repo_id "your-username/dataset-name" \
  --rows_json "$(cat examples/training_examples.json)"

# Add diverse conversational examples
uv run scripts/dataset_manager.py add_rows --repo_id "your-username/dataset-name" \
  --rows_json "$(cat examples/diverse_training_examples.json)"

# Mix both for comprehensive training data
uv run scripts/dataset_manager.py add_rows --repo_id "your-username/dataset-name" \
  --rows_json "$(jq -s '.[0] + .[1]' examples/training_examples.json examples/diverse_training_examples.json)"

Commands Reference

List Available Templates:

uv run scripts/dataset_manager.py list_templates

Quick Setup (Recommended):

uv run scripts/dataset_manager.py quick_setup --repo_id "your-username/dataset-name" --template classification

Manual Setup:

# Initialize repository
uv run scripts/dataset_manager.py init --repo_id "your-username/dataset-name" [--private]

# Configure with system prompt
uv run scripts/dataset_manager.py config --repo_id "your-username/dataset-name" --system_prompt "Your prompt here"

# Add data with validation
uv run scripts/dataset_manager.py add_rows \
  --repo_id "your-username/dataset-name" \
  --template qa \
  --rows_json '[{"question": "What is AI?", "answer": "Artificial Intelligence..."}]'

View Dataset Statistics:

uv run scripts/dataset_manager.py stats --repo_id "your-username/dataset-name"

Error Handling

  • Repository exists: Script will notify and continue with configuration
  • Invalid JSON: Clear error message with parsing details
  • Network issues: Automatic retry for transient failures
  • Token permissions: Validation before operations begin

Combined Workflow Examples

Example 1: Create Training Subset from Existing Dataset

# 1. Explore the source dataset
uv run scripts/sql_manager.py describe --dataset "cais/mmlu"
uv run scripts/sql_manager.py histogram --dataset "cais/mmlu" --column "subject"

# 2. Query and create subset
uv run scripts/sql_manager.py query \
  --dataset "cais/mmlu" \
  --sql "SELECT * FROM data WHERE subject IN ('nutrition', 'anatomy', 'clinical_knowledge')" \
  --push-to "username/mmlu-medical-subset" \
  --private

Example 2: Transform and Reshape Data

# Transform MMLU to QA format with correct answers extracted
uv run scripts/sql_manager.py query \
  --dataset "cais/mmlu" \
  --sql "SELECT question, choices[answer] as correct_answer, subject FROM data" \
  --push-to "username/mmlu-qa-format"

Example 3: Merge Multiple Dataset Splits

# Export multiple splits and combine
uv run scripts/sql_manager.py export \
  --dataset "cais/mmlu" \
  --split "*" \
  --output "mmlu_all.parquet"

Example 4: Quality Filtering

# Filter for high-quality examples
uv run scripts/sql_manager.py query \
  --dataset "squad" \
  --sql "SELECT * FROM data WHERE LENGTH(context) > 500 AND LENGTH(question) > 20" \
  --push-to "username/squad-filtered"

Example 5: Create Custom Training Dataset

# 1. Query source data
uv run scripts/sql_manager.py export \
  --dataset "cais/mmlu" \
  --sql "SELECT question, subject FROM data WHERE subject='nutrition'" \
  --output "nutrition_source.jsonl" \
  --format jsonl

# 2. Process with your pipeline (add answers, format, etc.)

# 3. Push processed data
uv run scripts/dataset_manager.py init --repo_id "username/nutrition-training"
uv run scripts/dataset_manager.py add_rows \
  --repo_id "username/nutrition-training" \
  --template qa \
  --rows_json "$(cat processed_data.json)"

More skills from huggingface

Hugging Face Cli
by huggingface
Execute Hugging Face Hub operations using the `hf` CLI. Use when the user needs to download models/datasets/spaces, upload files to Hub repositories, create repos, manage local cache, or run compute jobs on HF infrastructure. Covers authentication, file transfers, repository creation, cache operations, and cloud compute.
Hugging Face Evaluation
by huggingface
Add and manage evaluation results in Hugging Face model cards. Supports extracting eval tables from README content, importing scores from Artificial Analysis API, and running custom model evaluations with vLLM/lighteval. Works with the model-index metadata format.
Hugging Face Jobs
by huggingface
Run any workload on Hugging Face Jobs infrastructure. Covers UV scripts, Docker-based jobs, hardware selection, cost estimation, authentication with tokens, secrets management, timeout configuration, and result persistence. Designed for general-purpose compute workloads including data processing, inference, experiments, batch jobs, and any Python-based tasks.
Hugging Face Model Trainer
by huggingface
Train or fine-tune language models using TRL (Transformer Reinforcement Learning) on Hugging Face Jobs infrastructure. Covers SFT, DPO, GRPO and reward modeling training methods, plus GGUF conversion for local deployment. Includes guidance on dataset preparation, hardware selection, cost estimation, and model persistence.
Hugging Face Paper Publisher
by huggingface
Publish and manage research papers on Hugging Face Hub. Supports creating paper pages, linking papers to models/datasets, claiming authorship, and generating professional markdown-based research articles.
Hugging Face Tool Builder
by huggingface
Build reusable scripts and tools using the Hugging Face API. Useful when chaining or combining API calls, or when tasks will be repeated/automated. Creates reusable command line scripts to fetch, enrich, or process data from Hugging Face Hub.
Hugging Face Trackio
by huggingface
Track and visualize ML training experiments with Trackio. Use when logging metrics during training (Python API) or retrieving/analyzing logged metrics (CLI). Supports real-time dashboard visualization, HF Space syncing, and JSON output for automation.